GElist-class: Class "GElist"

Description Objects from the Class Slots Methods Author(s) See Also Examples

Description

This class is used in the methylPipe library to collect a set of GEcollection objects

Objects from the Class

Objects can be created by calls of the form new("GElist", ...) or using the function GElist(Objlist,names), see below. GElist are a collection of GEcollection objects (see GElist-class).

Slots

Objlist:

Object of class "list" : a list where each item is a GEcollection object

names:

Object of class "character" : vector of the names of the objects

Methods

"[["

signature(x = "GElist"): subsets the GElist returning a specific GEcollection object

"[[<-"

signature(x = "GElist"): replaces the specific GEcollection object in the GElist

"["

signature(x = "GElist"): subsets the GElist returning another GElist

Author(s)

Mattia Pelizzola

See Also

GElist-class

Examples

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gecollect_file <- system.file('extdata', 'gec.H1.Rdata', package='methylPipe')
load(gecollect_file)
gec1 <- gec.H1[start(gec.H1) < 153924]
gec2 <- gec.H1[start(gec.H1) > 153924]
gel.set <- GElist(g1=gec1, g2=gec2)

methylPipe documentation built on Nov. 8, 2020, 6:51 p.m.