pool.reads: Function to pool reads of replicates
In methylPipe: Base resolution DNA methylation data analysis

Description Usage Arguments Details Value Author(s) See Also Examples

Combine reads of replicates within a group.

1	pool.reads(files_location)

files_location

character; the path to the folder location consisting of tab separated text files

The function reads tab separated text files of methylation calls generated from meth.call or user supplied according to the format specified for BSprepare method. It pools all the reads of the replicates within a single group for each cytosine position and creates a file consisting of the cytosines with pooled reads information.

A text file of methylation calls are generated in the "files_location" folder.

Kamal Kishore

BSprepare