extractBinGRanges: Extract genomic ranges for a given bin
In methylPipe: Base resolution DNA methylation data analysis
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
For genomic ranges with N bins, extract the Genomic ranges for a given bin.
Usage
1
extractBinGRanges(GenoRanges, bin, nbins)
Arguments
GenoRanges
An object of class GRanges
bin
numeric; the bin corresponding to which data has to be extracted
nbins
numeric; the number of bins in which genomic regions are divided
Value
A GRanges Object
Author(s)
Mattia Pelizzola
See Also
Examples
1
2
3
gr_file <- system.file('extdata', 'GR_chr20.Rdata', package='methylPipe')
load(gr_file)
extractBinGRanges(GR_chr20, 2, 5)
methylPipe documentation built on Nov. 8, 2020, 6:51 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
For genomic ranges with N bins, extract the Genomic ranges for a given bin.
Usage
1 | extractBinGRanges(GenoRanges, bin, nbins)
|
Arguments
GenoRanges |
An object of class GRanges |
bin |
numeric; the bin corresponding to which data has to be extracted |
nbins |
numeric; the number of bins in which genomic regions are divided |
Value
A GRanges Object
Author(s)
Mattia Pelizzola
See Also
Examples
1 2 3 | gr_file <- system.file('extdata', 'GR_chr20.Rdata', package='methylPipe')
load(gr_file)
extractBinGRanges(GR_chr20, 2, 5)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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