GSE43592_mRNA: Top table of preprocessed mRNA of GSE43592 dataset.

In mirIntegrator: Integrating microRNA expression into signaling pathways for pathway analysis

Description

A data.frame with the Log fold change and p-value of preprocessed mRNA expression of GSE43592 dataset.

Usage

data(GSE43592_mRNA)

Value

A data frame with 19611 mRNAs with the following 8 variables: entre, ID, logFC, AveExpr, t, P.Value, adj.P.Val, B.

Source

Raw data obtained from http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE43592 and preprocessed with the limma package version 3.24.0.

References

M. Jernas, C. Malmestrom, M. Axelsson, I. Nookaew, H. Wadenvik, J. Lycke, and B. Olsson,MicroRNA regulate immune pathways in t-cells in multiple sclerosis (MS), BMC immunology, vol. 14, p. 32, 2013.

Ritchie ME, Phipson B, Wu D, Hu Y, Law CW, Shi W and Smyth GK (2015). limma powers differential expression analyses for RNA-sequencing and microarray studies. Nucleic Acids Research, 43(7), pp. e47.

Examples

data(GSE43592_mRNA)
head(GSE43592_mRNA)

mirIntegrator documentation built on Nov. 8, 2020, 8:28 p.m.