motifRG: A package for discriminative motif discovery, designed for high throughput sequencing dataset

Tools for discriminative motif discovery using regression methods

AuthorZizhen Yao
Date of publicationNone
MaintainerZizhen Yao <yzizhen@fhcrc.org>
LicenseArtistic-2.0
Version1.18.0

View on Bioconductor

Files in this package

motifRG/DESCRIPTION
motifRG/NAMESPACE
motifRG/R
motifRG/R/motif.rg.R motifRG/R/pwm.model.R motifRG/R/seq.util.R
motifRG/build
motifRG/build/vignette.rds
motifRG/data
motifRG/data/YY1.control.rda
motifRG/data/YY1.peak.rda
motifRG/data/ctcf.motifs.rda
motifRG/inst
motifRG/inst/Scripts
motifRG/inst/Scripts/analysis.R
motifRG/inst/css
motifRG/inst/css/header.html
motifRG/inst/doc
motifRG/inst/doc/motifRG.R
motifRG/inst/doc/motifRG.Rnw
motifRG/inst/doc/motifRG.pdf
motifRG/inst/extdata
motifRG/inst/extdata/MD.control.fa
motifRG/inst/extdata/MD.peak.fa
motifRG/inst/extdata/ctcf.fa
motifRG/man
motifRG/man/Motif.Rd motifRG/man/YY1.control.Rd motifRG/man/YY1.peak.Rd motifRG/man/ctcf.motifs.Rd motifRG/man/findMotif.Rd motifRG/man/findMotifFasta.Rd motifRG/man/findMotifFgBg.Rd motifRG/man/getSequence.Rd motifRG/man/motifLatexTable.Rd motifRG/man/plotMotif.Rd motifRG/man/refinePWMMotif.Rd motifRG/man/refinePWMMotifExtend.Rd motifRG/man/summaryMotif.Rd
motifRG/vignettes
motifRG/vignettes/motifRG.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.