Files in muscat

Multi-sample multi-group scRNA-seq data analysis tools

README.md R/mmDS.R R/pbFlatten.R R/simData.R R/utils-simData.R R/resDS.R R/pbMDS.R R/utils.R R/validity-checks.R R/pbHeatmap.R R/calcExprFreqs.R R/utils-mmDS.R R/utils-pbDS.R R/aggregateData.R R/data.R R/pbDS.R R/prepSim.R R/prepSCE.R vignettes/analysis.Rmd vignettes/simulation.Rmd man/resDS.Rd man/aggregateData.Rd man/pbFlatten.Rd man/simData.Rd man/pbHeatmap.Rd man/pbMDS.Rd man/pbDS.Rd man/mmDS.Rd man/prepSim.Rd man/data.Rd man/prepSCE.Rd man/calcExprFreqs.Rd tests/testthat.R tests/testthat/test-pbDS.R tests/testthat/test-resDS.R tests/testthat/test-mmDS.R tests/testthat/test-pbHeatmap.R tests/testthat/test-aggregateData.R tests/testthat/test-validityChecks.R tests/testthat/test-prepSCE.R tests/testthat/test-utils.R tests/testthat/test-simData.R tests/testthat/test-calcExprFreqs.R tests/testthat/test-prepSim.R tests/testthat/test-pbMDS.R inst/doc/analysis.R inst/doc/analysis.Rmd inst/doc/simulation.R inst/doc/simulation.Rmd