API for ncRNAtools
An R toolkit for non-coding RNA
| Global functions | |
|---|---|
| checkAlignmentEngine | Source code |
| checkBasicDotBracketString | Source code |
| checkEValueRfamSearch | Source code |
| checkGammaWeight | Source code |
| checkInferenceEngine | Source code |
| checkMultipleQuery | Source code |
| checkNumHomSeqsRfamSearch | Source code |
| checkRNAString | Source code |
| checkSecondaryStructureQuery | Source code |
| extractBasePairProbability | Source code |
| findPairedBases | Man page Source code |
| flattenDotBracket | Man page Source code |
| generatePairsProbabilityMatrix | Man page Source code |
| makeCompositeMatrix | Source code |
| pairsToSecondaryStructure | Man page Source code |
| plotCompositePairsMatrix | Man page Source code |
| plotPairsProbabilityMatrix | Man page Source code |
| predictAlternativeSecondaryStructures | Man page Source code |
| predictSecondaryStructure | Man page Source code |
| readCT | Man page Source code |
| readDotBracket | Man page Source code |
| removeNewLines | Source code |
| retrieveAlternativeSecondaryStructureResults | Source code |
| retrieveSecondaryStructureResults | Source code |
| rnaCentralGenomicCoordinatesSearch | Man page Source code |
| rnaCentralRetrieveEntry | Man page Source code |
| rnaCentralTextSearch | Man page Source code |
| sendAlternativeSecondaryStructureQuery | Source code |
| sendSecondaryStructureQuery | Source code |
| splitString | Source code |
| writeCT | Man page Source code |
| writeDotBracket | Man page Source code |
