Files in ncRNAtools
An R toolkit for non-coding RNA
NEWS
NAMESPACE
DESCRIPTION
ncRNAtools.Rproj
build/vignette.rds
R/ncRNAtools_secondaryStructurePredictionFunctions.R
R/ncRNAtools_readWriteFunctions.R
R/ncRNAtools_RNAcentralAccessFunctions.R
R/ncRNAtools_otherSupportFunctions.R
R/ncRNAtools_plottingFunctions.R
R/ncRNAtools_variableDefinitions.R
R/ncRNAtools_checkInputFunctions.R
vignettes/ncRNAtools.Rmd
vignettes/template.csl
vignettes/mystyle.css
vignettes/knitcitations.bib
man/predictAlternativeSecondaryStructures.Rd
man/readDotBracket.Rd
man/pairsToSecondaryStructure.Rd
man/findPairedBases.Rd
man/writeCT.Rd
man/plotCompositePairsMatrix.Rd
man/readCT.Rd
man/writeDotBracket.Rd
man/rnaCentralTextSearch.Rd
man/generatePairsProbabilityMatrix.Rd
man/rnaCentralGenomicCoordinatesSearch.Rd
man/plotPairsProbabilityMatrix.Rd
man/flattenDotBracket.Rd
man/rnaCentralRetrieveEntry.Rd
man/predictSecondaryStructure.Rd
tests/runTests.R
inst/doc/ncRNAtools.html
inst/doc/ncRNAtools.Rmd
inst/doc/ncRNAtools.R
inst/extdata/exampleDotBracket.dot
inst/extdata/exampleCT.ct
inst/extdata/exampleBasePairProbabilitiesTable.csv
inst/unitTests/test_secondaryStructurePrediction.R
inst/unitTests/test_otherFunctions.R
inst/unitTests/test_rnaCentralAccess.R
