ndexr: NDEx R client library

This package offers an interface to NDEx servers, e.g. the public server at http://ndexbio.org/. It can retrieve and save networks via the API. Networks are offered as RCX object and as igraph representation.

Package details

AuthorFlorian Auer <florian.auer@informatik.uni-augsburg.de>, Frank Kramer <frank.kramer@informatik.uni-augsburg.de>, Alex Ishkin <aleksandr.ishkin@thomsonreuters.com>, Dexter Pratt <depratt@ucsc.edu>
Bioconductor views DataImport Network Pathways
MaintainerFlorian Auer <florian.auer@informatik.uni-augsburg.de>
URL https://github.com/frankkramer-lab/ndexr
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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ndexr documentation built on March 13, 2021, 2 a.m.