ndex_find_networks: Search networks in NDEx (by description)

Description Usage Arguments Value REST query Note Examples

View source: R/ndex_networks.r

Description

This functions searches the public networks on an NDEx server for networks containing the supplied search string. T his search can be limited to certain accounts as well as in length.

Usage

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ndex_find_networks(ndexcon, searchString = "", accountName, start, size)

Arguments

ndexcon

object of class NDExConnection linkndex_connect

searchString

string by which to search

accountName

string (optional); constrain search to networks administered by this account

start

integer (optional); specifies that the result is the nth page of the requested data. The default value is 0

size

integer (optional); specifies the number of data items in each page. The default value is 100

Value

Data frame with network information: ID, name, whether it is public, edge and node count; source and format of network. NULL if no networks are found.

REST query

GET: ndex_config$api$search$network$search

Note

Compatible to NDEx server version 1.3 and 2.0

Search strings may be structured

Examples

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ndexcon = ndex_connect()
networks = ndex_find_networks(ndexcon,"p53") 

ndexr documentation built on April 29, 2020, 5:20 a.m.