Files in netSmooth
Network smoothing for scRNAseq

.travis.yml

hex-netsmooth.png

NAMESPACE

DESCRIPTION

netSmooth.Rproj

build/vignette.rds

data/mouse.ppi.rda

data/human.ppi.rda

data/smallscRNAseq.rda

data/smallPPI.rda

R/projectFromNetworkRecombine.R R/netSmooth.R R/projectOnNetwork.R R/l1NormalizeColumns.R R/scoreSmoothing.R R/robustClusters.R R/clusterExperimentWorkflow.R R/randomWalkByIterations.R R/smoothAndRecombine.R R/pickDimReduction.R R/calc2DEntropy.R R/randomWalkByMatrixInv.R R/data.R R/dimReduce.R R/l1NormalizeRows.R R/randomWalkBySolve.R R/clusterOne.R vignettes/netSmoothIntro.Rmd vignettes/buildingPPIsFromStringDB.Rmd

vignettes/bckgrnd.png

data-raw/make_ppi_from_string.R man/clusterOne.Rd man/pickDimReduction.Rd man/smoothAndRecombine-matrix-method.Rd man/scoreSmoothing.Rd man/robustClusters.Rd man/smallscRNAseq.Rd man/randomWalkByIterations.Rd man/l1NormalizeRows.Rd man/mouse.ppi.Rd man/calc2DEntropy.Rd man/dimReduce.Rd man/projectFromNetworkRecombine-matrix-method.Rd man/randomWalkByMatrixInv-matrix-method.Rd man/smallPPI.Rd man/projectOnNetwork.Rd man/l1NormalizeColumns.Rd man/randomWalkBySolve-matrix-method.Rd man/clusterExperimentWorkflow.Rd man/netSmooth.Rd man/human.ppi.Rd tests/testthat.R tests/testthat/test_netsmooth.R tests/testthat/test_recombinations.R

inst/CITATION

inst/doc/netSmoothIntro.html

inst/doc/buildingPPIsFromStringDB.R inst/doc/netSmoothIntro.R inst/doc/netSmoothIntro.Rmd inst/doc/buildingPPIsFromStringDB.Rmd

inst/doc/buildingPPIsFromStringDB.html

inst/data-raw/make_ppi_from_string.R

netSmooth documentation built on Nov. 8, 2020, 5:33 p.m.

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