calculate_adjacency: Calculate network adjacencies for filter

In netboost: Network Analysis Supported by Boosting

Description

Calculate network adjacencies for filter

Usage

calculate_adjacency(datan, filter, soft_power = 2,
  method = c("pearson", "kendall", "spearman"))

Arguments

datan	Data frame were rows correspond to samples and columns to features.
filter	Filter-Matrix as generated by the nb_filter function.
soft_power	Integer. Exponent of the transformation. Set automatically based on the scale free topology criterion if unspecified.
method	A character string specifying the method to be used for correlation coefficients.

Value

Vector with adjacencies for the filter

netboost documentation built on Nov. 8, 2020, 4:58 p.m.