Tools for functional network analysis (follow links for references):
netresponse discover context-specific activation patterns in interaction networks
Interaction Component Model ICMg to discover network modules. Can be supervised by functional information of the network.
For installation and usage, check the tutorial page.
You are welcome to:
Maintainer: Leo Lahti
Contributors: Olli-Pekka Huovilainen, Antonio Gusmao, Juuso Parkkinen
Acknowledgements: This program is partially based on the AIVGA Agglomerative Independent Variable Group Analysis source code (v. 1.0) Copyright (C) 2001-2007 Esa Alhoniemi, Antti Honkela, Krista Lagus, Jeremias Seppa, Harri Valpola, and Paul Wagner.
Matlab implementation is also available but not supported.
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