model.stats: model.stats
In netresponse: Functional Network Analysis
Description
Usage
Arguments
Value
Author(s)
References
Examples
Description
Subnetwork statistics: size and number of distinct responses for each subnet.
Usage
1
model.stats(models)
Arguments
models
NetResponse object or list of models
Value
A 'subnetworks x properties' data frame containing the following elements.
subnet.size:
Vector of subnetwork sizes.
subnet.responses:
Vector giving the number of responses in each subnetwork.
Author(s)
Leo Lahti <leo.lahti@iki.fi>
References
Leo Lahti et al.: Global modeling of transcriptional responses
in interaction networks. Bioinformatics (2010). See citation('netresponse')
for reference details.
Examples
1
2
3
4
5
# Load a pre-calculated netresponse model obtained with
# model <- detect.responses(toydata$emat, toydata$netw, verbose = FALSE)
data(toydata)
# Calculate summary statistics for the model
stat <- model.stats(toydata$model)
netresponse documentation built on Nov. 8, 2020, 5:04 p.m.
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Description Usage Arguments Value Author(s) References Examples
Description
Subnetwork statistics: size and number of distinct responses for each subnet.
Usage
1 | model.stats(models)
|
Arguments
models |
NetResponse object or list of models |
Value
A 'subnetworks x properties' data frame containing the following elements.
subnet.size: |
Vector of subnetwork sizes. |
subnet.responses:
|
Vector giving the number of responses in each subnetwork. |
Author(s)
Leo Lahti <leo.lahti@iki.fi>
References
Leo Lahti et al.: Global modeling of transcriptional responses in interaction networks. Bioinformatics (2010). See citation('netresponse') for reference details.
Examples
1 2 3 4 5 | # Load a pre-calculated netresponse model obtained with
# model <- detect.responses(toydata$emat, toydata$netw, verbose = FALSE)
data(toydata)
# Calculate summary statistics for the model
stat <- model.stats(toydata$model)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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