multiple co-inertia analysis of omics datasets
The main function in the package performing multiple co-inertia analysis on omics datasets
Multiple co-inertia analysis (MCIA) is a multivariate analysis method that could be used to analyze multiple tables measuring the same set of individuals, this package provides a one-stop function for MCIA and functions for subsequent analysis especially for multiple omics datasets.
Chen Meng, Aedin Culhane, Amin M. Gholami
Maintainer: Chen Meng <email@example.com>
Meng C, Kuster B, Culhane AC and Gholami AM. A multivariate approach to the integration of multi-omics datasets. (Manuscript under preparation)
Culhane AC, Thioulouse J, Perriere G, Higgins DG. (2005) MADE4: an R package for multivariate analysis of gene expression data.Bioinformatics. 21(11):2789-90.
S. Dray and A.B. Dufour. (2007) The ade4 package: implementing the duality diagram for ecologists. Journal of Statistical Software 22(4):1-20.
ade4 and package
data(NCI60_4arrays) mcoin <- mcia(NCI60_4arrays)