selectVar.cia: Selecting variables from result of CIA

Description Usage Arguments Details Value Author(s) See Also

View source: R/selectVar.cia.R

Description

To select variables in CIA variable space, the function is called by selectVar.

Usage

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## S3 method for class 'cia'
selectVar(x, axis1 = 1, axis2 = 2, 
  df1.a1.lim = c(-Inf, Inf), df1.a2.lim = c(-Inf, Inf), 
  df2.a1.lim = df1.a1.lim, df2.a2.lim = df1.a2.lim, 
  sepID.data = NULL, sepID.sep = "_", ...)

Arguments

x

The result returned by cia

axis1

Integer, the column number for the x-axis. The default is 1.

axis2

Integer, the column number for the y-axis. The default is 2.

df1.a1.lim

A vector containing 2 numbers indicating the range of X axis of selected on the 1st data.frame. The first value limiting the lower boundary, the second value limiting the upper boundary.

df1.a2.lim

The range of Y axis of selected on the 1st datasets.

df2.a1.lim

The range of X axis of selected on the 2nd dataset.

df2.a2.lim

The range of Y axis of selected on the 2nd dataset.

sepID.data

See plotVar.mcia

sepID.sep

See plotVar.mcia

...

Other arguments

Details

cia projecting variables from different datasets to a two dimensional space. This function supplies a method selecting variables according to the co-ordinates of variables

Value

Returns a data.frame describing which variables are presented on which data.frame within the limited region(s).

Author(s)

Chen Meng

See Also

See Also as selectVar.mcia


omicade4 documentation built on Nov. 8, 2020, 7:47 p.m.