NCI60_4arrays: Microarray gene expression profiles of the NCI 60 cell lines...

Description Usage Format Source References Examples

Description

The 60 human tumour cell lines are derived from patients with leukaemia, melanoma, lung, colon, central nervous system, ovarian, renal, breast and prostate cancers. The cell line panel is widely used in anti-cancer drug screen. In this dataset, a subset of microarray gene expression of the NCI 60 cell lines from four different platforms are combined in a list, which could be used as input to mcia directly.

Usage

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Format

The format is: List of 4 data.frames

Source

Cell Miner http://discover.nci.nih.gov/cellminer/

References

Reinhold WC, Sunshine M, Liu H, Varma S, Kohn KW, Morris J, Doroshow J, Pommier Y CellMiner: A Web-Based Suite of Genomic and Pharmacologic Tools to Explore Transcript and Drug Patterns in the NCI-60 Cell Line Set. Cancer Research. 2012 Jul, 15;72(14):3499-511

Examples

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Example output

Loading required package: ade4
         Length Class      Mode
agilent  60     data.frame list
hgu133   60     data.frame list
hgu133p2 60     data.frame list
hgu95    60     data.frame list

omicade4 documentation built on Nov. 8, 2020, 7:47 p.m.