Man pages for ontoProc
processing of ontologies of anatomy, cell lines, and so on

allGOtermsallGOterms: data.frame with ids and terms
cellTypeToGOutilities for approximate matching of cell type terms to GO...
cleanCLOnamesobtain named character vector of terms from Cell Line...
c-TermSet-methodcombine TermSet instances
demoAppdemonstrate the use of makeSelectInput
dropStopdropStop is a utility for removing certain words from text...
fastGrepsome fields of interest are lists, and grep per se should not...
getCellOntoload ontologies that may include non-ascii strings and...
humrnahumrna: a data.frame of SRA metadata related to RNA-seq in...
liberalMapProduce a data.frame with a set of naive terms mapped to all...
makeSelectInputgenerate a selectInput control for an ontologyIndex slice
mapOneNaiveuse grep or agrep to find a match for a naive token into...
minicorpusminicorpus: a vector of annotation strings found in 'study...
nomenCheckuprepair nomenclature mismatches (to curated term set) in a...
secLevGensimple generation of children of 'choices' given as terms,...
selectFromMapselect a set of elements from a term 'map' and return a...
siblings_TAGgenerate a TermSet with siblings of a given term, excluding...
stopWordsstopWords: vector of stop words from xpo6.com
TermSet-classmanage ontological data with tags and a DataFrame instance
ontoProc documentation built on Nov. 1, 2018, 4:29 a.m.