ctmarks: app to review molecular properties of cell types via cell...
In ontoProc: processing of ontologies of anatomy, cell lines, and so on
Description
Usage
Arguments
Value
Note
Description
app to review molecular properties of cell types via cell ontology
Usage
1
ctmarks(cl)
Arguments
cl
an import of a Cell Ontology (or extended Cell Ontology) in ontology_index form
Value
a data.frame with features for selected cell types
Note
Prototype of harvesting of cell ontology by searching
has_part, has_plasma_membrane_part, intersection_of and allied
ontology relationships. Uses shiny. Can perform better if getPROnto() and getGeneOnto() values
are in .GlobalEnv as pr and go respectively.
ontoProc documentation built on Nov. 8, 2020, 4:49 p.m.
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Description Usage Arguments Value Note
Description
app to review molecular properties of cell types via cell ontology
Usage
1 | ctmarks(cl)
|
Arguments
cl |
an import of a Cell Ontology (or extended Cell Ontology) in ontology_index form |
Value
a data.frame with features for selected cell types
Note
Prototype of harvesting of cell ontology by searching has_part, has_plasma_membrane_part, intersection_of and allied ontology relationships. Uses shiny. Can perform better if getPROnto() and getGeneOnto() values are in .GlobalEnv as pr and go respectively.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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