CLfeats: produce a data.frame of features relevant to a Cell Ontology...
In ontoProc: processing of ontologies of anatomy, cell lines, and so on
Description
Usage
Arguments
Value
Note
Examples
Description
produce a data.frame of features relevant to a Cell Ontology class
Usage
1
CLfeats(ont, tag = "CL:0001054")
Arguments
ont
instance of ontologyIndex ontology
tag
character(1) a CL: class tag
Value
a data.frame instance
Note
This function will look in the intersection_of and has_part,
lacks_part components of the CL entry to find properties asserted
of or inherited by the cell type identified in 'tag'
Examples
1
2
3
4
cl = getCellOnto()
pr = getPROnto()
go = getGeneOnto()
CLfeats(cl, tag="CL:0001054")
ontoProc documentation built on Nov. 8, 2020, 4:49 p.m.
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Description Usage Arguments Value Note Examples
Description
produce a data.frame of features relevant to a Cell Ontology class
Usage
1 | CLfeats(ont, tag = "CL:0001054")
|
Arguments
ont |
instance of ontologyIndex ontology |
tag |
character(1) a CL: class tag |
Value
a data.frame instance
Note
This function will look in the intersection_of and has_part, lacks_part components of the CL entry to find properties asserted of or inherited by the cell type identified in 'tag'
Examples
1 2 3 4 | cl = getCellOnto()
pr = getPROnto()
go = getGeneOnto()
CLfeats(cl, tag="CL:0001054")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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