gate_quad_sequential: sequential quadrant gating function

In openCyto: Hierarchical Gating Pipeline for flow cytometry data

Description

The order of 1d-gating is determined so that the gates better capture the distributions of flow data.

Usage

gate_quad_sequential(fr, channels, gFunc, min = NULL, max = NULL, ...)

Arguments

fr	flowFrame
channels	character two channels used for gating
gFunc	the name of the 1d-gating function to be used for either dimension
min	a numeric vector that sets the lower bounds for data filtering
max	a numeric vector that sets the upper bounds for data filtering
...	other arguments passed to .find_peak (e.g. 'num_peaks' and 'adjust'). see tailgate

Value

a filters that contains four rectangleGates

openCyto documentation built on Nov. 8, 2020, 5:40 p.m.