runTutorial: The openPrimeR Tutorial.

In openPrimeR: Multiplex PCR Primer Design and Analysis

Description

Starts a Shiny app containing the openPrimeR tutorial, which was built using the learnr package. The application starts locally and should open a new tab in your default browser. If no browser is opened, please consider the console output to identify the local port on which the server is running.

Usage

runTutorial(dev = FALSE)

Arguments

dev	A logical indicating whether to start the development version of the tutorial (default: FALSE).

Value

Opens the openPrimeR tutorial in a web browser.

Note

The Shiny app can be started only if you fulfill all of the suggested package dependencies for the Shiny framework, so please ensure that you've installed openPrimeR including all suggested dependencies.

Examples

## Not run: 
# Open the tutorial
if (interactive()) {
runTutorial()
}

## End(Not run)

Example output

There are missing/non-functioning external tools.
To use the full potential of openPrimeR, please make sure
that the required versions of the speciied tools are
 
                installed and that they are functional:
o MELTING (http://www.ebi.ac.uk/biomodels/tools/melting/)
o ViennaRNA (http://www.tbi.univie.ac.at/RNA/)
o OligoArrayAux (http://unafold.rna.albany.edu/OligoArrayAux.php)
o MAFFT (http://mafft.cbrc.jp/alignment/software/)
o Pandoc (http://pandoc.org)
The number of cores for was set to '1' by 'parallel_setup()'.

openPrimeR documentation built on Nov. 16, 2020, 2 a.m.