Description Usage Arguments Value
Retrieve statistics on covered templates for multiple primer sets.
1 2 3 4 5 6 7 8 9 | ## S4 method for signature 'list'
get_cvg_stats(
primers,
templates,
for.viewing = FALSE,
total.percentages = FALSE,
allowed.mismatches = Inf,
cvg.definition = c("constrained", "basic")
)
|
primers |
A list with objects of class |
templates |
A list with objects of class |
for.viewing |
Whether the table should be formatted for viewing rather than processing. |
total.percentages |
Whether group coverage percentages should relate to all template sequences or just those templates belonging to a specific group. |
allowed.mismatches |
The maximal allowed number of mismatches. By default, the number of mismatches is not restricted. |
cvg.definition |
If |
Data frame with coverage statistics.
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