all_expn_data: Single-cell RNA-seq expression data for melanoma samples

In phemd: Phenotypic EMD for comparison of single-cell samples

Description

This dataset contains normalized single-cell RNA-seq expression data for 19 melanoma samples (immune cells).

Usage

data(all_expn_data)

Format

A list of length 19 with each element representing a distinct sample. Each list element (sample) is a matrix with dimension num_genes x num_cells.

Source

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE72056

References

Tirosh, I. et al. Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq. Science 352, 189–196 (2016)

phemd documentation built on Nov. 8, 2020, 8:15 p.m.