plrs-class: Class 'plrs'

In plrs: Piecewise Linear Regression Splines (PLRS) for the association between DNA copy number and gene expression

Description

An S4 class representing the output of the plrs function.

Slots

coefficients:

Object of class numeric containing spline coefficients

fitted.values:

Object of class numeric containing the fitted values

residuals:

Object of class numeric containing the residuals

X:

Object of class matrix containing the design matrix

data:

Object of class list containing input data

mdata:

Object of class list containing (possibly modified) data used to fit the model (See modify.conf).

QP:

Object of class list containing input elements used for quadratic programming. If the model is unconstrained this contains a light version of an lm object.

test:

Object of class list containing results from testing.

cb:

Object of class list containing lower and upper bounds for predicted values.

selected:

Object of class logical indicating whether the model results from a selection procedure.

type:

Object of class character giving the type of model

call.arg:

Object of class list containing the input arguments (for reproducibility)

Methods

coef

Returns the coefficients

criteria

See criteria

effects

Returns matrix of effects

fitted

Returns the fitted values

knots

Returns the knots

model.matrix

Returns the design matrix

plot

See plot.plrs

predict

See predict.plrs

print

Print the object information

residuals

Returns the residuals

show

Print the object information

summary

Print a summary of the object information

Author(s)

Gwenael G.R. Leday [e-mail]

plrs documentation built on April 28, 2020, 6:09 p.m.