createBiopax: This function creates a new Biopax model from scratch
In rBiopaxParser: Parses BioPax files and represents them in R
Description
Usage
Arguments
Value
Author(s)
Examples
Description
This function creates a new Biopax model from scratch. This is not necessary if you want to parse a BioPAX export from a file, please see: readBiopax.
Returns a biopax model, which is a list with named elements:
- df
The data.frame representing the biopax in R
- ns_rdf
RDF Namespace
- ns_owl
OWL Namespace
- ns_bp
Biopax Namespace
- file
NULL
Usage
1
createBiopax(level = 3)
Arguments
level
integer. Specifies the BioPAX level.
Value
A biopax model
Author(s)
Frank Kramer
Examples
1
biopax = createBiopax(level=2)
rBiopaxParser documentation built on Nov. 8, 2020, 8:21 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
This function creates a new Biopax model from scratch. This is not necessary if you want to parse a BioPAX export from a file, please see: readBiopax. Returns a biopax model, which is a list with named elements:
- df
The data.frame representing the biopax in R
- ns_rdf
RDF Namespace
- ns_owl
OWL Namespace
- ns_bp
Biopax Namespace
- file
NULL
Usage
1 | createBiopax(level = 3)
|
Arguments
level |
integer. Specifies the BioPAX level. |
Value
A biopax model
Author(s)
Frank Kramer
Examples
1 | biopax = createBiopax(level=2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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