This function generates the xmlTree from the supplied biopax model.

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Description

This function is used internally by writeBiopax. It can also be called directly with a fitting dataframe in list(df=data.frame()), but this will probably break things.

Usage

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internal_generateXMLfromBiopax(biopax, namespaces = namespaces,
  verbose = TRUE)

Arguments

biopax

A biopax model

namespaces

A list of namespaces to use for the generated XML/RDF file

verbose

logical

Value

Returns the xmlTree generated from the supplied biopax model.

Author(s)

Frank Kramer

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