estP0: Estimate the fraction of true null hypotheses.
In reconsi: Resampling Collapsed Null Distributions for Simultaneous Inference
Description
Usage
Arguments
Details
Value
Description
Estimate the fraction of true null hypotheses.
Usage
1
estP0(statObs, fitAll, z0quantRange, smooth.df)
Arguments
statObs
A vector of observed z-values
fitAll
the estimated normal null
z0quantRange
a number of quantiles between 0 and 0.5
smooth.df
degrees of freedom for the spline smoother
Details
A natural spline is used over a range of intervals.
Based on the qvalue::qvalue() function and
Storey and Tibshirani, 2003
Value
The estimated null fraction, the value of the spline evaluated
at the first element of z0quantRange
reconsi documentation built on Nov. 8, 2020, 5:04 p.m.
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Description Usage Arguments Details Value
Description
Estimate the fraction of true null hypotheses.
Usage
1 | estP0(statObs, fitAll, z0quantRange, smooth.df)
|
Arguments
statObs |
A vector of observed z-values |
fitAll |
the estimated normal null |
z0quantRange |
a number of quantiles between 0 and 0.5 |
smooth.df |
degrees of freedom for the spline smoother |
Details
A natural spline is used over a range of intervals. Based on the qvalue::qvalue() function and Storey and Tibshirani, 2003
Value
The estimated null fraction, the value of the spline evaluated at the first element of z0quantRange
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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