getFdr: Calculate tail-area (Fdr) and local (fdr) false discovery...

In reconsi: Resampling Collapsed Null Distributions for Simultaneous Inference

Description

Calculate tail-area (Fdr) and local (fdr) false discovery rates, based on a certain null distribution

Usage

getFdr(statObs, fitAll, fdr, zSeq, p, p0, zValsDensObs, smoothObs, ...)

Arguments

statObs	Vector of observed z-values
fitAll	The parameters of the estimated random null
fdr	local false discovery rate, already estimated
zSeq	Support of the density estimation
p	the number of hypotheses
p0	The estimated fraction of null hypotheses
zValsDensObs	estimated densities of observed test statistics
smoothObs	A boolean, should estimated observed densities of the test statistics be used in estimating the Fdr
...	more arguments, ignored

Value

A list with components

Fdr	Tail are false discovery rate
fdr	Local false discovery rate

reconsi documentation built on Nov. 8, 2020, 5:04 p.m.