rfaRm: An R interface to the Rfam database

rfaRm provides a client interface to the Rfam database of RNA families. Data that can be retrieved include RNA families, secondary structure images, covariance models, sequences within each family, alignments leading to the identification of a family and secondary structures in the dot-bracket format.

Getting started

Package details

AuthorLara Selles Vidal, Rafael Ayala, Guy-Bart Stan, Rodrigo Ledesma-Amaro
Bioconductor views DataImport FunctionalGenomics MultipleSequenceAlignment ThirdPartyClient Visualization
MaintainerLara Selles Vidal <lara.selles12@imperial.ac.uk>, Rafael Ayala <r.ayala14@imperial.ac.uk>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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rfaRm documentation built on March 16, 2021, 6:01 p.m.