API for ribosomeProfilingQC
Ribosome Profiling Quality Control

Global functions
$,cvgd-method Man page
$<-,cvgd-method Man page
FLOSS Man page Source code
PAmotif Man page Source code
RPFsCounts Source code
[[,cvgd,ANY,ANY-method Man page
[[<-,cvgd,ANY,ANY,ANY-method Man page
assignReadingFrame Man page Source code
codonUsage Man page Source code
countReads Man page Source code
coverageDepth Man page Source code
coverageRates Man page Source code
cvgd Man page Source code
cvgd-class Man page
estimatePsite Man page Source code
filterCDS Man page Source code
frameCounts Man page Source code
getCvgs Source code
getFPKM Man page Source code
getFeatureLen Source code
getORFscore Man page Source code
getPsiteCoordinates Man page Source code
ggBar Man page Source code
metaPlot Man page Source code
normByRUVs Man page Source code
normHelper Source code
plotDistance2Codon Man page Source code
plotFrameDensity Man page Source code
plotSpliceEvent Man page Source code
plotTE Man page Source code
plotTranscript Man page Source code
prepareCDS Man page Source code
readsDistribution Man page Source code
readsEndPlot Man page Source code
readsLenToKeep Man page Source code
ribosomeReleaseScore Man page Source code
shiftReads Source code
shiftReadsByFrame Man page Source code
show,cvgd-method Man page
simulateRPF Man page Source code
spliceEvent Man page Source code
strandPlot Man page Source code
summaryReadsLength Man page Source code
switch.strand Source code
translationalEfficiency Man page Source code
ribosomeProfilingQC documentation built on Aug. 8, 2020, 2 a.m.