getScore: Function to get low dimensional embedding matrix
In scBFA: A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq

Function to get low dimensional embedding matrix

1	getScore(modelEnv)

modelEnv

output environment variable

Z: N by K low dimensional embedding

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GeneExpr = matrix(rpois(15,1),3,5)
bfa_model = scBFA(scData = GeneExpr,X = NULL,numFactors =2)
Z = getScore(bfa_model)

scBFA documentation built on Nov. 8, 2020, 5:24 p.m.

scBFA index

README.md Gene Detection Analysis for scRNA-seq

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