scDatExList: Data: Toy example data list

In scDD: Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions

Description

Toy example data list (one item for each of two conditions) for 100 genes to illustrate how to use the function preprocess.

Usage

data(scDatExList)

Format

A list of two matrices (one for each of two conditions) labeled "C1" and "C2". Each matrix contains data for 100 genes and a variable number of samples (78 in C1 and 64 in C2).

Value

An RData object, see Format section for details

References

Korthauer KD, Chu LF, Newton MA, Li Y, Thomson J, Stewart R, Kendziorski C. A statistical approach for identifying differential distributions in single-cell RNA-seq experiments. Genome Biology. 2016 Oct 25;17(1):222. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-1077-y

Examples

# load toy example data list 
data(scDatExList)

scDD documentation built on Nov. 8, 2020, 7:10 p.m.