API for scRepertoire
A toolkit for single-cell immune receptor profiling
| Global functions | |
|---|---|
| abundanceContig | Man page Source code |
| addVariable | Man page Source code |
| alluvialClonotypes | Man page Source code |
| assignCT | Source code |
| cellT | Source code |
| checkContigBarcodes | Source code |
| checkList | Source code |
| checkSingleObject | Source code |
| clonalDiversity | Man page Source code |
| clonalHomeostasis | Man page Source code |
| clonalOverlap | Man page Source code |
| clonalProportion | Man page Source code |
| clonesizeDistribution | Man page |
| combineBCR | Man page Source code |
| combineExpression | Man page Source code |
| combineTCR | Man page Source code |
| compareClonotypes | Man page |
| contig_list | Man page |
| diversityCall | Source code |
| expression2List | Man page Source code |
| filteringMulti | Source code |
| filteringNA | Source code |
| getCirclize | Man page Source code |
| grabMeta | Source code |
| hammingCompare | Source code |
| highlightClonotypes | Man page Source code |
| lengthContig | Man page Source code |
| lengthDF | Source code |
| makeGenes | Source code |
| modifyBarcodes | Source code |
| morisitaIndex | Source code |
| occupiedscRepertoire | Man page Source code |
| overlapIndex | Source code |
| parseBCR | Source code |
| parseContigs | Source code |
| parseTCR | Source code |
| quantContig | Man page Source code |
| quiet | Source code |
| removingMulti | Source code |
| removingNA | Source code |
| screp_example | Man page |
| stripBarcode | Man page Source code |
| subsetContig | Man page Source code |
| theCall | Source code |
| vizVgenes | Man page |
