PlotSetPair-class: PlotSetPair Reference Class

In seqplots: An interactive tool for visualizing NGS signals and sequence motif densities along genomic features using average plots and heatmaps

Description

PlotSetPair Reference Class

Fields

means

numeric vector of means

stderror

numeric vector of standard errors

conint

numeric vector of 95% confidence intervals

all_ind

numeric vector giving the relative position of the bins in the genome

numeric

value giving the length of anchored distance, NULL for point feature plots

desc

character string describing the PlotSetPair

heatmap

numeric matrix used for plotting the heatmap

Methods

as.list()

Convert to PlotSetPair list.

plot(what = "a", ...)

Plot the PlotSetPair class. See plot for datails.

See Also

Other classes: MotifSetup-class, PlotSetArray-class, PlotSetList-class

seqplots documentation built on Nov. 8, 2020, 4:52 p.m.