ssvFeatureBars: bar plots of set sizes

In seqsetvis: Set Based Visualizations for Next-Gen Sequencing Data

Description

bar plots of set sizes

Usage

ssvFeatureBars(
  object,
  show_counts = TRUE,
  bar_colors = NULL,
  return_data = FALSE
)

Arguments

object	passed to ssvMakeMembTable for conversion to membership table
show_counts	logical. should counts be displayed at the center of each bar. default is TRUE
bar_colors	character. rcolor or hex colors. default of NULL uses RColorBrewer Dark2.
return_data	logical. If TRUE, return value is no longer ggplot and is instead the data used to generate that plot. Default is FALSE.

Value

ggplot of bar plot of set sizes

Examples

ssvFeatureBars(list(1:3, 2:6))
ssvFeatureBars(CTCF_in_10a_overlaps_gr)
ssvFeatureBars(S4Vectors::mcols(CTCF_in_10a_overlaps_gr)[,2:3])

seqsetvis documentation built on Nov. 8, 2020, 5:57 p.m.