cutoffByTF: Optimal cutoff values for logistic regression models.

Description Usage Format See Also

Description

This dataset contains optimal cutoff scores for the response value of logistic regression models. The cutoff is based on optimal F1-scores. A separate model was trained For each of 124 TF ChIP-seq datasets in human GM12878 cells. The model performance was calculated with Hi-C and ChIA-PET interactions using 10-fold cross-validation.

Usage

1

Format

An object of class tbl_df with 121 rows and 3 columns:

TF

Transcription factor name

max_cutoff

The optimal cutoff on the logistic regression response value

max_f1

The optimal f1-score associated to the max_cutoff value

See Also

modelBest10Avg and TFspecificModels


sevenC documentation built on Nov. 8, 2020, 5:35 p.m.