Description Usage Arguments Value Author(s) See Also

This function is closely modelled on `write.table`

. It writes an
object of class `SnpMatrix`

as a text file with one line for
each row of the matrix. Genotpyes are written in numerical form,
*i.e.* as 0, 1 or 2 (where 1 denotes heterozygous) or,
optionally, as a pair of alleles (each coded 1 or 2).

1 |

`x` |
The object to be written |

`file` |
The name of the output file |

`as.alleles` |
If |

`append` |
If |

`quote` |
If |

`sep` |
The string separating entries within a line |

`eol` |
The string terminating each line |

`na` |
The string written for missing genotypes |

`row.names` |
If |

`col.names` |
If |

A numeric vector giving the dimensions of the matrix written

David Clayton dc208@cam.ac.uk

`write.table`

, `SnpMatrix-class`

,
`XSnpMatrix-class`

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