Spatial analysis of in situ cytometry data.
spicyR provides a series of functions to aid in the analysis of both immunofluorescence and mass cytometry imaging data as well as other assays that can deeply phenotype individual cells and their spatial location such as high-definiton spatial transcriptomics.
# Install the development version from GitHub: # install.packages("devtools") devtools::install_github("ellispatrick/spicyR") library(spicyR)
spicyR is still under active development. We would greatly appreciate any and
all feedback related to the package.
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