dim: Retrieve the Dimensions of a SpliceRList

In spliceR: Classification of alternative splicing and prediction of coding potential from RNA-seq data.

Description

Retrieve the number of (transcripts) contained in SpliceRList.

Usage

## S3 method for class 'SpliceRList'
dim(x)
## S3 method for class 'SpliceRList'
length(x)

Arguments

x	an object of class SpliceRList.

Details

As documented in SpliceRList, a SpliceRList contains two objects; a 'transcript_features' GRanges object, containing transcript information, and a 'exon_features' object, containing exon information. Dim and length currently only gives information about the number of transcripts in a SpliceRList object, i.e. the length() of the 'transcript_features' GRanges object.

Value

Numeric vector of length 1, indicating the number of trancript comparisons in the SpliceRList.

See Also

dim in the base package.

spliceR documentation built on May 2, 2018, 2:50 a.m.