Fang: Human embryo gene expression dataset from Fang et al. (2010)

In supraHex: supraHex: a supra-hexagonal map for analysing tabular omics data

Description

Human embryo dataset contains gene expression levels (5441 genes and 18 embryo samples) from Fang et al. (2010).

Usage

data(Fang)

Value

• Fang: a gene expression matrix of 5441 genes x 18 samples, involving six successive stages, each with three replicates.

• Fang.sampleinfo: a matrix containing the information of the 18 samples for the expression matrix Fang. The three columns correspond to the sample information: "Name", "Stage" and "Replicate".

• Fang.geneinfo: a matrix containing the information of the 5441 genes for the expression matrix Fang. The three columns correspond to the gene information: "AffyID", "EntrezGene" and "Symbol".

References

Fang et al. (2010). Transcriptome analysis of early organogenesis in human embryos. Developmental Cell, 19(1):174-84.

supraHex documentation built on Nov. 26, 2020, 2:01 a.m.