API for switchBox
Utilities to train and validate classifiers based on pair switching using the K-Top-Scoring-Pair (KTSP) algorithm

Global functions
KTSP.CalculateSignedScore Source code
KTSP.Classify Man page Source code
KTSP.Train Man page Source code
KTSP.tiedRank Source code
KbyMeasurement Source code
KbyTtest Source code
SWAP.Calculate.BasicTSPScores Man page Source code
SWAP.Calculate.SignedTSPScores Man page Source code
SWAP.CalculateScores Man page Source code
SWAP.CalculateSignedScore Man page Source code
SWAP.Check.Input Source code
SWAP.Filter.Wilcoxon Man page Source code
SWAP.Format.Input Source code
SWAP.GetKFoldIndices Source code
SWAP.GetKTSP.PredictionStats Man page Source code
SWAP.GetKTSP.Result Man page Source code
SWAP.GetKTSP.TrainTestResults Man page Source code
SWAP.KTSP.CV Man page Source code
SWAP.KTSP.Classify Man page Source code
SWAP.KTSP.LOO Man page Source code
SWAP.KTSP.Pairs.Disjoint Source code
SWAP.KTSP.Statistics Man page Source code
SWAP.KTSP.Train Man page Source code
SWAP.KTSP.Train.Plain Source code
SWAP.KTSP.Train.Plain.Ties Source code
SWAP.KTSP.Train.Restricted Source code
SWAP.KTSP.Train.Restricted.Ties Source code
SWAP.Kby.Measurement Man page Source code
SWAP.Kby.Ttest Man page Source code
SWAP.MakeTSPTable Man page Source code
SWAP.MakeTrainTestData Source code
SWAP.PlotKTSP.GenePairBoxplot Man page Source code
SWAP.PlotKTSP.GenePairClassesBoxplot Man page Source code
SWAP.PlotKTSP.GenePairScatter Man page Source code
SWAP.PlotKTSP.Genes Man page Source code
SWAP.PlotKTSP.TrainTestROC Man page Source code
SWAP.PlotKTSP.Votes Man page Source code
SWAP.ScoreMatrixToVector Source code
SWAP.ScoreVectorToMatrix Source code
SWAP.Train.1TSP Man page Source code
SWAP.Train.KTSP Man page Source code
Train.1TSP Source code
basicTSPScores Source code
bestKByTtest Source code
calculateScores Source code
calculateSignedScore Source code
calculate_tsp_instance Source code
getPredictionStats Source code
get_kfold_indices Source code
getkTSPResult Source code
getkTSPTrainTestResults Source code
kTSPCV Source code
kTSPLOO Source code
makeTSPTable Source code
make_train_test_data Source code
matTesting Man page
matTraining Man page
plotGenePairBoxplot Source code
plotGenePairClassesBoxplot Source code
plotGenePairScatter Source code
plotGenes Source code
plotkTSPTrainTestROC Source code
plotkTSPVotes Source code
score_matrix_to_vector Source code
score_vector_to_matrix Source code
signedTSPScores Source code
switchBox Man page
switchBox-package Man page
testingGroup Man page
train1TSP Source code
trainingGroup Man page
trainkTSP Source code
switchBox documentation built on May 31, 2017, 11:39 a.m.