Instead of using
data to load the
synapterTiny data set,
synapterTinyData will load it and initialise it for proper
downstream analysis, during which the
file, provided with the package and references inside the object
needs, to be accessed. However, as the exact location can not be known
in advance, the reference is updated with the file's correct local
This data set has been generated with the
constructor. Note that the input data file sizes have been reduced by
depleting many rows (peptides and EMRTs) from the original
In addition, several columns that where not necessary for
processing were also removed. As such, the data stored in
synapterTiny does not relect the data obtained when following
the section 'Preparing the input data' in the section, without however
affecting the processing and final results.
A character vector with the data set name, "synapterTiny". Used
for its side effect of loading
synapterTiny, an instance of
Improving qualitative and quantitative performance for MSE-based label free proteomics, N.J. Bond, P.V. Shliaha, K.S. Lilley and L. Gatto, Journal of Proteome Research, 2013, in press.
The Effects of Travelling Wave Ion Mobility Separation on Data Independent Acquisition in Proteomics Studies, P.V. Shliaha, N.J. Bond, L. Gatto and K.S. Lilley, Journal of Proteome Research, 2013, in press.