poissonScaling: generic method for "poissonScaling"

Description Usage Arguments Details Value Author(s) Examples

Description

generic method for "poissonScaling"

Possion scaling for data matrices.

Usage

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poissonScaling(object, offset = 1, ...)

## S4 method for signature 'MassSpectra'
poissonScaling(object, offset = 1, ...)

Arguments

object

object of class MassSpectra

offset

numeric value for poisson scaling

...

further args

Details

Possion scaling is proposed as the method of choice for ToF-SIMS data see Keenan and Kotula 2004. This implementation was done according to a description in Multivariate Analysis of SIMS spectra in ToF-SIMS: Materials Analysis by Mass Spectrometry, Vickerman and Briggs 2013 and the eigenvector wiki. The offset is described in the eigenvector wiki.

Value

object of class MassSpectra with poission scaled mass spectra in slot nz

object of class MassSpectra

Author(s)

Lorenz Gerber lorenz.gerber@slu.se

Examples

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## poisson scaling of MassSpectra objects
testImage <- MassImage('dummy')
testImage <- poissonScaling(testImage)
## Not run: 
# poission scaling on real data
library(tofsimsData)
data(tofsimsData)
par(mfcol=c(2,2))
plot(testImage,type='l')
image(testImage)
testImage <- poissonScaling(testImage)
plot(testImage,type='l')
image(testImage)

## End(Not run)


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