recalibrate: Generic method recalibrate
In tofsims: Import, process and analysis of Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) imaging data
Description
Usage
Arguments
Value
Examples
Description
Generic method recalibrate
method recalibrate
Usage
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recalibrate(object)
## S4 method for signature 'MassSpectra'
recalibrate(object)
Arguments
object
object of class MassSpctra
Value
object of class MassSpectra, recalibrated using the data from
slots calibPoints
object of class MassSpectra, recalibrated mass values
Examples
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library(tofsimsData)
data(tofsimsData)
testSpectra <- calibPointNew(testSpectra, mz = 15, value = 15.01551)
testSpectra <- calibPointNew(testSpectra, mz = 181, value = 181.0228)
calibPoints(testSpectra)
par(mfcol=c(1,2))
plot(testSpectra,mzRange=c(38.5,40.5),type='l')
testSpectra <- recalibrate(testSpectra)
plot(testSpectra, mzRange=c(38.5,40.5), type='l')
tofsims documentation built on Nov. 8, 2020, 5:10 p.m.
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Description Usage Arguments Value Examples
Description
Generic method recalibrate
method recalibrate
Usage
1 2 3 4 | recalibrate(object)
## S4 method for signature 'MassSpectra'
recalibrate(object)
|
Arguments
object |
object of class MassSpctra |
Value
object of class MassSpectra, recalibrated using the data from slots calibPoints
object of class MassSpectra, recalibrated mass values
Examples
1 2 3 4 5 6 7 8 9 | library(tofsimsData)
data(tofsimsData)
testSpectra <- calibPointNew(testSpectra, mz = 15, value = 15.01551)
testSpectra <- calibPointNew(testSpectra, mz = 181, value = 181.0228)
calibPoints(testSpectra)
par(mfcol=c(1,2))
plot(testSpectra,mzRange=c(38.5,40.5),type='l')
testSpectra <- recalibrate(testSpectra)
plot(testSpectra, mzRange=c(38.5,40.5), type='l')
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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