exportSequences: Export cluster sequences for motif search analysis

Description Usage Arguments Value Author(s) See Also

View source: R/export.R

Description

Export cluster sequences for motif search analysis (FASTA format), e.g. using MEME-ChIP

Usage

1
exportSequences(clusters, filename = 'wavClusters.fasta')

Arguments

clusters

GRanges object containing individual clusters as identified by the filterClusters function

filename

A character defining the BED file name. Default to "wavClusters.fasta"

Value

A FASTA file containing the cluster sequences

Author(s)

Federico Comoglio

See Also

filterClusters


wavClusteR documentation built on Nov. 8, 2020, 6:54 p.m.