API for wavClusteR
Sensitive and highly resolved identification of RNA-protein interaction sites in PAR-CLIP data

Global functions
annotateClusters Man page Source code
computeLogOdds Source code
computePosterior Source code
computelogOdds Source code
estimateFDR Man page Source code
estimateP Source code
exportClusters Man page Source code
exportCoverage Man page Source code
exportGR Source code
exportHighConfSub Man page Source code
exportSequences Man page Source code
filterClusters Man page Source code
filterClustersCWT Source code
filterClustersMRN Source code
fitMixtureModel Man page Source code
getAllSub Man page Source code
getClusters Man page Source code
getClustersCWT Source code
getClustersMRN Source code
getComplSubst Source code
getCountTable Source code
getCoverageAtSubst Source code
getExpInterval Man page Source code
getHighConfSub Man page Source code
getLogOdd Source code
getMetaCoverage Man page Source code
getMetaGene Man page Source code
getMetaTSS Man page Source code
getOdd Source code
getSEcoverage Source code
getSignal Source code
getWindow Source code
learnThreshold Source code
leftBound Source code
model Man page
plotSizeDistribution Man page Source code
plotStatistics Man page Source code
plotSubstitutions Man page Source code
processChunk Source code
processMD Source code
readSortedBam Man page Source code
rightBound Source code
wavCWTPeaksCF Source code
wavClusteR Man page
wavClusteR-package Man page
wavClusteR documentation built on Nov. 1, 2018, 3:45 a.m.