plotSpec-methods: Plot mass spectra from the profile matrix

Description Arguments Value Methods See Also

Description

Uses the pre-generated profile mode matrix to plot mass spectra over a specified retention time range.

Arguments

object

the xcmsRaw object

ident

logical, use mouse to identify and label peaks

vline

numeric vector with locations of vertical lines

...

arguments passed to profRange

Value

If ident == TRUE, an integer vector with the indecies of the points that were identified. Otherwise a two-column matrix with the plotted points.

Methods

object = "xcmsRaw"

plotSpec(object, ident = FALSE, vline = numeric(0), ...)

See Also

xcmsRaw-class


xcms documentation built on May 18, 2019, 2 a.m.