plotTIC-methods: Plot total ion count

In xcms: LC-MS and GC-MS Data Analysis

Description

Plot chromatogram of total ion count. Optionally allow identification of target peaks and viewing/identification of individual spectra.

Arguments

object	the xcmsRaw object
ident	logical, use mouse to identify and label chromatographic peaks
msident	logical, use mouse to identify and label spectral peaks

Value

If ident == TRUE, an integer vector with the indecies of the points that were identified. Otherwise a two-column matrix with the plotted points.

Methods

object = "xcmsRaw"

plotTIC(object, ident = FALSE, msident = FALSE)

See Also

xcmsRaw-class

xcms documentation built on Nov. 8, 2020, 5:13 p.m.