Description Arguments Value Methods See Also
These two methods use “well behaved” peak groups to calculate retention time deviations for every time point of each sample. Use smoothed deviations to align retention times.
object |
the |
missing |
number of missing samples to allow in retention time correction groups |
extra |
number of extra peaks to allow in retention time correction correction groups |
smooth |
either |
span |
degree of smoothing for local polynomial regression fitting |
family |
if |
plottype |
if |
col |
vector of colors for plotting each sample |
ty |
vector of line and point types for plotting each sample |
An xcmsSet
object
retcor(object, missing = 1, extra = 1,
smooth = c("loess", "linear"), span = .2,
family = c("gaussian", "symmetric"),
plottype = c("none", "deviation", "mdevden"),
col = NULL, ty = NULL)
xcmsSet-class
,
loess
retcor.obiwarp
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